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Bioinformatics A Practical Guide to NCBI Databases and Sequence Alignments

Bioinformatics A Practical Guide to NCBI Databases and Sequence Alignments

Bioinformatics: A Practical Guide to NCBI Databases and Sequence Alignments provides the basics of bioinformatics and in-depth coverage of NCBI databases sequence alignment and NCBI Sequence Local Alignment Search Tool (BLAST). As bioinformatics has become essential for life sciences the book has been written specifically to address the need of a large audience including undergraduates graduates researchers healthcare professionals and bioinformatics professors who need to use the NCBI databases retrieve data from them and use BLAST to find evolutionarily related sequences sequence annotation construction of phylogenetic tree and the conservative domain of a protein to name just a few. Technical details of alignment algorithms are explained with a minimum use of mathematical formulas and with graphical illustrations. Key Features Provides readers with the most-used bioinformatics knowledge of bioinformatics databases and alignments including both theory and application via illustrations and worked examples. Discusses the use of Windows Command Prompt Linux shell R and Python for both Entrez databases and BLAST. The companion website (http://www. hamiddi. com/instructors/) contains tutorials R and Python codes instructor materials including slides exercises and problems for students. This is the ideal textbook for bioinformatics courses taken by students of life sciences and for researchers wishing to develop their knowledge of bioinformatics to facilitate their own research. | Bioinformatics A Practical Guide to NCBI Databases and Sequence Alignments

GBP 82.99
1

Semigroups of Bounded Operators and Second-Order Elliptic and Parabolic Partial Differential Equations

A Handbook of Statistical Analyses using R

Design and Analysis of Experiments and Observational Studies using R

Applied Stochastic Modelling

Bounds for Determinants of Linear Operators and their Applications

The New S Language

Multilevel Modeling Using Mplus

Algorithms for Next-Generation Sequencing

Forecasting and Analytics with the Augmented Dynamic Adaptive Model (ADAM)

Forecasting and Analytics with the Augmented Dynamic Adaptive Model (ADAM)

Forecasting and Analytics with the Augmented Dynamic Adaptive Model (ADAM) focuses on a time series model in Single Source of Error state space form called “ADAM” (Augmented Dynamic Adaptive Model). The book demonstrates a holistic view to forecasting and time series analysis using dynamic models explaining how a variety of instruments can be used to solve real life problems. At the moment there is no other tool in R or Python that would be able to model both intermittent and regular demand would support both ETS and ARIMA work with explanatory variables be able to deal with multiple seasonalities (e. g. for hourly demand data) and have a support for automatic selection of orders components and variables and provide tools for diagnostics and further improvement of the estimated model. ADAM can do all of that in one and the same framework. Given the rising interest in forecasting ADAM being able to do all those things is a useful tool for data scientists business analysts and machine learning experts who work with time series as well as any researchers working in the area of dynamic models. Key Features: • It covers basics of forecasting • It discusses ETS and ARIMA models • It has chapters on extensions of ETS and ARIMA including how to use explanatory variables and how to capture multiple frequencies • It discusses intermittent demand and scale models for ETS ARIMA and regression • It covers diagnostics tools for ADAM and how to produce forecasts with it • It does all of that with examples in R.

GBP 89.99
1

Introduction to Machine Learning with Applications in Information Security

Introduction to Machine Learning with Applications in Information Security

Introduction to Machine Learning with Applications in Information Security Second Edition provides a classroom-tested introduction to a wide variety of machine learning and deep learning algorithms and techniques reinforced via realistic applications. The book is accessible and doesn’t prove theorems or dwell on mathematical theory. The goal is to present topics at an intuitive level with just enough detail to clarify the underlying concepts. The book covers core classic machine learning topics in depth including Hidden Markov Models (HMM) Support Vector Machines (SVM) and clustering. Additional machine learning topics include k-Nearest Neighbor (k-NN) boosting Random Forests and Linear Discriminant Analysis (LDA). The fundamental deep learning topics of backpropagation Convolutional Neural Networks (CNN) Multilayer Perceptrons (MLP) and Recurrent Neural Networks (RNN) are covered in depth. A broad range of advanced deep learning architectures are also presented including Long Short-Term Memory (LSTM) Generative Adversarial Networks (GAN) Extreme Learning Machines (ELM) Residual Networks (ResNet) Deep Belief Networks (DBN) Bidirectional Encoder Representations from Transformers (BERT) and Word2Vec. Finally several cutting-edge deep learning topics are discussed including dropout regularization attention explainability and adversarial attacks. Most of the examples in the book are drawn from the field of information security with many of the machine learning and deep learning applications focused on malware. The applications presented serve to demystify the topics by illustrating the use of various learning techniques in straightforward scenarios. Some of the exercises in this book require programming and elementary computing concepts are assumed in a few of the application sections. However anyone with a modest amount of computing experience should have no trouble with this aspect of the book. Instructor resources including PowerPoint slides lecture videos and other relevant material are provided on an accompanying website: http://www. cs. sjsu. edu/~stamp/ML/.

GBP 62.99
1

Grid Computing Techniques and Applications

Grid Computing Techniques and Applications

Designed for senior undergraduate and first-year graduate students Grid Computing: Techniques and Applications shows professors how to teach this subject in a practical way. Extensively classroom-tested it covers job submission and scheduling Grid security Grid computing services and software tools graphical user interfaces workflow editors and Grid-enabling applications. The book begins with an introduction that discusses the use of a Grid computing Web-based portal. It then examines the underlying action of job submission using a command-line interface and the use of a job scheduler. After describing both general Internet security techniques and specific security mechanisms developed for Grid computing the author focuses on Web services technologies and how they are adopted for Grid computing. He also discusses the advantages of using a graphical user interface over a command-line interface and presents a graphical workflow editor that enables users to compose sequences of computational tasks visually using a simple drag-and-drop interface. The final chapter explains how to deploy applications on a Grid. The Grid computing platform offers much more than simply running an application at a remote site. It also enables multiple geographically distributed computers to collectively obtain increased speed and fault tolerance. Illustrating this kind of resource discovery this practical text encompasses the varied and interconnected aspects of Grid computing including how to design a system infrastructure and Grid portal. Supplemental Web ResourcesThe author’s Web site offers various instructional resources including slides and links to software for programming assignments. Many of these assignments do not require access to a Grid platform. Instead the author provides step-by-step instructions for installing open-source software to deploy and test Web and Grid services a Grid computing workflow editor to design and test workflows and a Grid computing portal to deploy portlets. | Grid Computing Techniques and Applications

GBP 69.99
1

Anyone Can Code The Art and Science of Logical Creativity

Elements of Parallel Computing

Fundamentals of Causal Inference With R

Fundamentals of Causal Inference With R

Overall this textbook is a perfect guide for interested researchers and students who wish to understand the rationale and methods of causal inference. Each chapter provides an R implementation of the introduced causal concepts and models and concludes with appropriate exercises. An-Shun Tai & Sheng-Hsuan Lin in BiometricsOne of the primary motivations for clinical trials and observational studies of humans is to infer cause and effect. Disentangling causation from confounding is of utmost importance. Fundamentals of Causal Inference explains and relates different methods of confounding adjustment in terms of potential outcomes and graphical models including standardization difference-in-differences estimation the front-door method instrumental variables estimation and propensity score methods. It also covers effect-measure modification precision variables mediation analyses and time-dependent confounding. Several real data examples simulation studies and analyses using R motivate the methods throughout. The book assumes familiarity with basic statistics and probability regression and R and is suitable for seniors or graduate students in statistics biostatistics and data science as well as PhD students in a wide variety of other disciplines including epidemiology pharmacy the health sciences education and the social economic and behavioral sciences. Beginning with a brief history and a review of essential elements of probability and statistics a unique feature of the book is its focus on real and simulated datasets with all binary variables to reduce complex methods down to their fundamentals. Calculus is not required but a willingness to tackle mathematical notation difficult concepts and intricate logical arguments is essential. While many real data examples are included the book also features the Double What-If Study based on simulated data with known causal mechanisms in the belief that the methods are best understood in circumstances where they are known to either succeed or fail. Datasets R code and solutions to odd-numbered exercises are available on the book's website at www. routledge. com/9780367705053. Instructors can also find slides based on the book and a full solutions manual under 'Instructor Resources'. | Fundamentals of Causal Inference With R

GBP 56.99
1

Multiple Imputation in Practice With Examples Using IVEware

Piece-wise and Max-Type Difference Equations Periodic and Eventually Periodic Solutions

Quantitative Finance with Python A Practical Guide to Investment Management Trading and Financial Engineering

Tree-Based Methods for Statistical Learning in R

Tree-Based Methods for Statistical Learning in R

Tree-based Methods for Statistical Learning in R provides a thorough introduction to both individual decision tree algorithms (Part I) and ensembles thereof (Part II). Part I of the book brings several different tree algorithms into focus both conventional and contemporary. Building a strong foundation for how individual decision trees work will help readers better understand tree-based ensembles at a deeper level which lie at the cutting edge of modern statistical and machine learning methodology. The book follows up most ideas and mathematical concepts with code-based examples in the R statistical language; with an emphasis on using as few external packages as possible. For example users will be exposed to writing their own random forest and gradient tree boosting functions using simple for loops and basic tree fitting software (like rpart and party/partykit) and more. The core chapters also end with a detailed section on relevant software in both R and other opensource alternatives (e. g. Python Spark and Julia) and example usage on real data sets. While the book mostly uses R it is meant to be equally accessible and useful to non-R programmers. Consumers of this book will have gained a solid foundation (and appreciation) for tree-based methods and how they can be used to solve practical problems and challenges data scientists often face in applied work. Features: Thorough coverage from the ground up of tree-based methods (e. g. CART conditional inference trees bagging boosting and random forests). A companion website containing additional supplementary material and the code to reproduce every example and figure in the book. A companion R package called treemisc which contains several data sets and functions used throughout the book (e. g. there’s an implementation of gradient tree boosting with LAD loss that shows how to perform the line search step by updating the terminal node estimates of a fitted rpart tree). Interesting examples that are of practical use; for example how to construct partial dependence plots from a fitted model in Spark MLlib (using only Spark operations) or post-processing tree ensembles via the LASSO to reduce the number of trees while maintaining or even improving performance.

GBP 82.99
1

Solution Techniques for Elementary Partial Differential Equations

Direct and Projective Limits of Geometric Banach Structures

Modeling and Simulation in Python

Data Science in Practice

Producing High-Quality Figures Using SAS/GRAPH and ODS Graphics Procedures